Att 4c_MDS Lab level variables

Attachment 4c

CSBS Minimum Dataset Variables, Lab

SAS variable Number	eHARS dataset name	SAS Variable Name	Label	Description	Values	SAS Format	HARS Var Name
	PARID			CSBS unique identifier
7	receive_dt	receive_dt	The date the lab that performed the test received the specimen from either a healthcare provider or another laboratory.		Yyyymmdd, $8.	8	7
13	result	result	The result value.		10	10	13
12	result_interpretation	result_interpretation	An interpretation of the lab result. For viral load tests, values include: within range =, below range (limit) <, above range (limit) >.	< - Below limit, = - Within limit. > - Above limit	$RSLT_IN, $100.	100	12
12	result_interpretation	result_interpretation	For incidence surveillance, this is the interpretation of the STARHS test result.	01 - Long term, 02 - Specimen never received, 91 - Quantity not sufficient, 92 - Specimen never received, 93 - Broken in transit, 94 - Other, indeterminate, 95 - Not sufficient antibodies, 99 - Undefined result	$ST_RSLT	100	12
16	result_rpt_dt	result_rpt_dt	The date the tests result was reported or processed at the lab.		yyyymmdd	8	16
14	result_units	result_units	The reported units.	C/ML - Copies/mL, CNT – Count, LOG - Log copies/mL, PCT – Percent, SOD - Standard optical density	$RSLT_UT, $4.	4	14
6	sample_dt	sample_dt	The date the specimen was collected.		yyyymmdd	8	6
11	loinc_cd	loinc_cd	The Logical Observation Identifier Names and Codes (LOINC) value.	14092-1 HIV-1 IFA; 18396-2 - HIV-1 P24 Antigen; 21009-6 - HIV-1 Western Blot; 25835-0 - HIV-1 RNA NASBA; 25836-8 - HIV-1 RNA RT-PCR; 29327-4 – RAPID; 5017-9 - HIV-1 RNA bDNA; 5018-7 - HIV-1 RNA PCR (QUAL); 5220-9 - HIV-1 EIA; 5223-3 - HIV-1/2 EIA; 5224-1 - HIV-2 EIA; 5225-8 - HIV-2 Western Blot; 58900-2 - HIV 1/2 Ag/Ab; 6429-5 - HIV-1 Culture; 8127-3 - CD4 Count; 8128-1 - CD4 Percent; 9837-6 - HIV-1 Proviral DNA (QUAL); L-001 - Western blot-Legacy; L-002 - Other antibody-RIPA-Legacy; L-003 - Other antibody-Latex Ag-Legacy; L-004 - Other antibody-Peptide Legacy; L-005 - Other antibody-Rapid-Legacy; L-006 - Other antibody-IgA-Legacy; L-007 - Other antibody-IVAP-Legacy; L-008 - Other antibody-Other-Legacy; L-009 - Other antibody-Unspecified; L-010 - Viral Load-Other-Legacy; L-011 - Viral Load-Unspecified-Legacy; L-012 - Detection/Antigen/Viral-Other-Legacy; L-013 - Detection/Antigen/Viral-Unspecified-Legacy; PH-002 - HIV-1 RNA Other; PH-007 - HIV-2 Culture; ST-001 - STARHS (BED); ST-002 – STARHS (Vironostika LS); ST-003 - STARHS (Avidity); ST-888 - STARHS (other); ST-999 - STARHS (unknown);	$LNC_CD	7	11

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