Zoonotic Event Data Dictionary

Att. H Zoonotic SARS-CoV-2 Event Form Data Dictionary.xlsx

One Health Surveillance for Zoonotic SARS-CoV-2 Events

Zoonotic Event Data Dictionary

OMB: 0920-1371

Document [xlsx]
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Variable Name Meaning Answer Values Category
[1] "ï..primary_key" System generated ID

[2] "lname" System generated last name

[3] "fname" System generated first name

[4] "created_by" System generated created by

[5] "submitter_name" Submitter Name

[6] "created_at" Time and Date form created

[7] "state" Submitter State

[8] "designation" Submitter Designation Local Health Official, State Animal Health Official, State Wildlife Official
[9] "animal_id" Animal ID

[10] "species" Species Ferret, Bat, Cat, Cougar, Dog, Gorilla, Hamster, Lion, Mink, Non-Human Primate, Puma, Rabbit, River Otter, Snow Leopard, Tiger
[11] "breed" Breed

[12] "dob" Date of birth

[13] "agey" Age in years

[14] "agem" Age in months

[15] "sex" Sex

[16] "s_d_t" State, District, Territory where animal resides

[17] "county" Country, Parish, etc.

[18] "date_notif" Date of initial notification

[19] "date_startinv" Start date of investigation

[20] "reason_report" Reason for report Active surveillance, population of animals with symptoms consistent with SARS-CoV-2, Sick animal (suspect case), Susptected or confirmed human COVID-19 case that has close contact with an animal; Test positive animal (presumptive or confirmed case), Unknown
[21] "housing" Animal Housing Situation Animal Rehabilitation Facility; Animal shelter; Feral; Group home; Household pet, unknown if other animals in houseshold; Long term care facility/Nursing home; Mass shelter situation; Multi-pet house; Pet store/facility; Police station/fire department; Prison/Jail; Research Facility; Single pet house; Unknown; Wildlife; Zoo
[22] "access" Animal's typical access to outdoor spaces Indoor & outdoor; Indoor only; Outdoor confined; Outdoor free-roaming; Unknown
[23] "linkletter" Linkletter for households with more than one animal

[24] "link_human" Epi link to person with COVID-19 No; Unknown, Yes - person with confirmed COVID-29; Yes - person with suspected COVID-19
[25] "interaction_human" Exposure to positive person Facilitystaff, Owner/Caretaker, Same household
[26] "link_animal" Epi link to animal with SARS-CoV-2 No; Unknown, Yes - animal with confirmed with SARS-CoV-2; Yes - animal with suspected SARS-CoV-2
[27] "interaction_animal" Exposure to positive animal Same enclosure; Same facility; Same household; Unknown
[28] "clinical" Clinical Signs Cough/Shortness of breath; Fever; Sneezing; Lethargy; Ocular Discharge; Nasal Discharge; Vomiting; Diarrhea
[29] "cough" Cough cough
[30] "sign_other" Other clinical signs

[31] "finaloutcome" Final outcome of animal Asymptomatic; Deceased; Euthanized; Recovered; Unknown
[32] "euthanasia" Date of euthanasia/deceased

[33] "necropsy" Necropsy performed?

[34] "necropsy_report" Necropsy report

[35] "comorbidities" Pre-exisiting conditions/co-morbidities Yes; No; Unknown
[36] "pre_existing" List of pre-existing conditions

[37] "test_recommended" Was testing recommended for this animal? Not aware/contacted prior to testing; Test NOT recommended; Test recommended
[38] "test_rec_wnot" Why was test not recommended? Other etiologies not yet ruled out; Symptoms did not align with SARS; No epi link to infection; Resource/time limitation (including financial)
[39] "test_conducted" Was testing conducted? Test conducted; Test NOT conducted; Unknown if test conducted
[40] "initial_sample_date" Initial sample date

[41] "swab_oral" Oral Swab results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[42] "swab_nasal" Nasal Swab results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[43] "swab_conjunctival" Conjunctival Swab results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[44] "swab_rectal" Rectal Swab results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[45] "fecal" Fecal results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[46] "fur" Fur results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[47] "serum" Serum results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[48] "postmortem" Postmortem results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[49] "sample_other" Other Sample results Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[50] "initial_lab" Initial lab type Academic; NAHLN lab; Not recommended for testing; Private
[51] "name_lab" Name of Presumptive Test Lab

[52] "presumptive_test_result" Presumptive Test Result Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[53] "state_lab" State of Presumptive Test Lab

[54] "case_status" USDA definition case status Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[55] "test_confirm" If test was confirmed at USDA, what was the result? Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[56] "confirmation_datenvsl" NVSL Confirmation Date

[57] "case_invest"


[58] "collab" Collaboration with another health professional Yes, No, Unknown
[59] "name_collab" Collaborating health professional name

[60] "case_closed" Case status Active, pending, closed
[61] "notes" Notes

[62] "ref_num" Reference number

[63] "animal" Animal record referral number

[64] "initial_sample_date2" Initial sample date 2

[65] "swab_oral2" Oral Swab results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[66] "swab_nasal2" Nasal Swab results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[67] "swab_conjunctival2" Conjunctival Swab results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[68] "swab_rectal2" Rectal Swab results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[69] "fecal2" Fecal results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[70] "fur2" Fur results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[71] "serum2" Serum results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[72] "postmortem2" Postmortem results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[73] "sample_other2" Other Sample results 2 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[74] "initial_lab2" Initial lab type 2 Academic; NAHLN lab; Not recommended for testing; Private
[75] "name_lab2" Name of Presumptive Test Lab 2

[76] "state_lab2" State of Presumptive Test Lab 2

[77] "presumptive_test_result2" Presumptive Test Result 2 Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[78] "case_status2" USDA definition case status 2 Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[79] "test_confirm2" If test was confirmed at USDA, what was the result? 2 Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[80] "confirmation_datenvsl2" NVSL Confirmation Date 2

[81] "collab2" Collaboration with another health professional 2 Yes, No, Unknown
[82] "name_collab2" Collaboration with another health professional 2

[83] "initial_sample_date3" Initial sample date 3

[84] "swab_oral3" Oral Swab results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[85] "swab_nasal3" Nasal Swab results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[86] "swab_conjunctival3" Conjunctival Swab results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[87] "swab_rectal3" Rectal Swab results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[88] "fecal3" Fecal results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[89] "fur3" Fur results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[90] "serum3" Serum results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[91] "postmortem3" Postmortem results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[92] "sample_other3" Other Sample results 3 Inconclusive; Negative; Not submitted; Pending; Positive; Unknown
[93] "initial_lab3" Initial lab type 3 Academic; NAHLN lab; Not recommended for testing; Private
[94] "name_lab3" Name of Presumptive Test Lab 3

[95] "state_lab3" State of Presumptive Test Lab 3

[96] "presumptive_test_result3" Presumptive Test Result 3 Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[97] "case_status3" USDA definition case status 3 Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[98] "test_confirm3" If test was confirmed at USDA, what was the result? 3 Confirmed, Negative, Not a case, Presumptive, Suspect, Unknown
[99] "confirmation_datenvsl3" NVSL Confirmation Date 3

[100] "collab3" Collaboration with another health professional 3 Yes, No, Unknown
[101] "name_collab3" Collaboration with another health professional 3

[102] "historical_age" Age - OLD

[103] "locale" Local - OLD

[104] "housing_other" Other housing

[105] "fever" Fever

[106] "lethargy" Lethargy

[107] "sneeze" Sneeze

[108] "nasal" Nasal

[109] "ocular" Ocular

[110] "vomit" Vomit

[111] "diarrhea" Diarrhea

[112] "sign_unknown" Unknown clincial signs

[113] "health" health - old variable

[114] "diff_diagnosis" differential diagnosis - OLD

[115] "historical_filename" Historical file name - OLD

[116] "historical_qstates" Historical Q states - OLD

[117] "historical_lstates" Historical L states - OLD

[118] "historical_designation_init" Historical Designation - OLD

[119] "display_id" Display ID - OLD

[120] "human_ids" Human IDs

[121] "animal_ids" Animal IDs

[122] "state_abbr" State abbreviation

[123] "state_group_rid" State groud rid

[124] "remove" Remove file

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